DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
Data intensive science for everyone.
A Python package for creating and manipulating musical patterns, designed for use in algorithmic composition, generative music and sonification. Can be used to generate MIDI events, MIDI files, OSC messages, or custom actions.
Structural variant toolkit for VCFs
Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).
A tool to circularize genome assemblies
🚀 A sequencing simulator
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
CLI tool for flexible and fast adaptive sampling on ONT sequencers
Antimicrobial Resistance Identification By Assembly
WisecondorX — An evolved WISECONDOR
Accurate and flexible loops calling tool for 3D genomic data.
Protein Identification with Deep Learning
A package for designing compact and comprehensive capture probe sets.
Graph-based assembly phasing
Python3 scripts to manipulate FASTA and FASTQ files
de novo virus assembler of Illumina paired reads
High-throughput mapping and domain partitioning of antigen receptor sequences
To associate your repository with the sequencing topic, visit your repo's landing page and select "manage topics."