Issues

• Add the length of the squiggle to the debug log

  enhancement
  LooseLab/readfish#392 · Filter by author Adoni5 opened on Jan 31, 2025

• Sort out logger in read_until_client/base.py

  enhancement
  LooseLab/readfish#390 · Filter by author Adoni5 opened on Jan 28, 2025

• feature py3.12 support

  enhancementgood first issueidea
  LooseLab/readfish#376 · Filter by author Adoni5 opened on Aug 26, 2024
  4

• Detect native adaptive sampling and warrn.

  enhancement
  LooseLab/readfish#368 · Filter by author mattloose opened on Jul 31, 2024
  1

• next release candidate checklist

  enhancementepic
  LooseLab/readfish#362 · Filter by author Adoni5 opened on Jun 19, 2024
  

• chore: update FAQ

  choreenhancementgood first issue
  LooseLab/readfish#360 · Filter by author Adoni5 opened on Jun 19, 2024

• Provide additional TOML files which provide examples of host depletion and other use cases for readfish.

  documentationenhancement
  LooseLab/readfish#338 · Filter by author mattloose opened on Feb 27, 2024
  

• Readfish intermittently crashes during barcoded experiment

  bug
  LooseLab/readfish#329 · Filter by author jamesemery opened on Feb 1, 2024
  5

  

• Validation of decisions listed in Barcodes/Regions in Toml

  bugenhancement
  LooseLab/readfish#328 · Filter by author Adoni5 opened on Feb 1, 2024
  1

• Filtering implementation epic

  enhancementepicneeds discussion
  LooseLab/readfish#305 · Filter by author Adoni5 opened on Oct 17, 2023
  16

  

• Move Changelog to docs/CHANGELOG.md

  enhancementidea
  LooseLab/readfish#301 · Filter by author Adoni5 opened on Oct 12, 2023
  1

• Names are confusing in the stats module

  enhancementidea
  LooseLab/readfish#298 · Filter by author Adoni5 opened on Oct 12, 2023

• BUG: long reads segfault stats

  bugskill-issue
  LooseLab/readfish#286 · Filter by author Adoni5 opened on Oct 11, 2023

• VersionInfo class for readfish

  enhancement
  LooseLab/readfish#275 · Filter by author Adoni5 opened on Oct 9, 2023 · Version info class
  1

• Future plan - write a mapper plugin for readfish that can share a reference library.

  enhancement
  LooseLab/readfish#258 · Filter by author mattloose opened on Oct 6, 2023
  3

• Store logs as compressed files

  enhancement
  LooseLab/readfish#53 · Filter by author mattloose opened on May 27, 2020
  4