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@ga4gh

Global Alliance for Genomics and Health

An international coalition, formed to enable the sharing of genomic and clinical data.

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  1. ga4gh-schemas ga4gh-schemas Public archive

    Models and APIs for Genomic data. RETIRED 2018-01-24

    Python 220 112

  2. benchmarking-tools benchmarking-tools Public

    Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

    HTML 212 47

  3. phenopacket-schema phenopacket-schema Public

    Repository for the GA4GH phenopacket schema

    Java 102 34

  4. vrs vrs Public

    Extensible specification for representing and uniquely identifying biological sequence variation

    Jupyter Notebook 99 43

  5. ga4gh-server ga4gh-server Public archive

    Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

    Python 98 91

  6. task-execution-schemas task-execution-schemas Public

    98 32

Repositories

Showing 10 of 173 repositories
  • vrs-python Public

    GA4GH Variation Representation Python Implementation

    ga4gh/vrs-python's past year of commit activity
    Python 64 Apache-2.0 44 68 11 Updated Oct 3, 2026
  • cat-vrs Public

    A terminology and data model for describing categorical variation concepts.

    ga4gh/cat-vrs's past year of commit activity
    Makefile 9 Apache-2.0 7 35 1 Updated Oct 3, 2026
  • aai Public

    This is the repository for the GA4GH Data Security Work Stream, containing AAI and DSIP.

    ga4gh/aai's past year of commit activity
    Python 25 16 4 6 Updated Oct 3, 2026
  • data-security Public
    ga4gh/data-security's past year of commit activity
    Python 0 0 8 0 Updated Oct 2, 2026
  • refcloud-ui Public
    ga4gh/refcloud-ui's past year of commit activity
    TypeScript 0 0 0 15 Updated Oct 2, 2026
  • refcloud-api Public Forked from ga4gh/ga4gh-starter-kit-drs

    Open, extensible server implementation of the GA4GH Data Repository Service (DRS) specification

    ga4gh/refcloud-api's past year of commit activity
    Java 0 Apache-2.0 9 0 2 Updated Oct 2, 2026
  • ga4gh_workflow_clinic_gsoc_2026 Public

    GA4GH Workflow Clinic

    ga4gh/ga4gh_workflow_clinic_gsoc_2026's past year of commit activity
    Python 1 Apache-2.0 1 2 2 Updated Oct 2, 2026
  • gkm-starter-kit Public

    A single community-facing entry point that helps someone understand and adopt GKS in practice.

    ga4gh/gkm-starter-kit's past year of commit activity
    Python 2 CC0-1.0 1 1 1 Updated Oct 2, 2026
  • va-spec Public

    An information model for representing variant annotations.

    ga4gh/va-spec's past year of commit activity
    Jupyter Notebook 28 Apache-2.0 7 121 (1 issue needs help) 2 Updated Oct 2, 2026
  • ga4gh-agentic-harness-mcp Public Forked from mfiume/ga4gh-agentic-harness-mcp

    Universal MCP server for GA4GH services and the GA4GH Implementation Registry (DRS/TRS/WES + generic service-info), with pluggable auth and dual stdio/HTTP transports.

    ga4gh/ga4gh-agentic-harness-mcp's past year of commit activity
    Python 0 Apache-2.0 1 0 1 Updated Oct 2, 2026
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