BMGLab
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ComThinkDataSci
ComThinkDataSci PublicThis repo is to manage lecture notes and practice codes for the class "Computational Thinking and Data Science"
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Repositories
- PeakATail Public
Single-cell APA peak calling and poly(A) tail analysis from scRNA-seq. Detects polyadenylation sites, quantifies 3'UTR length switching, and compares APA usage across cell clusters and samples.
- DesCARTes Public
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- Project_PeakATail Public
Analysis code, figure source data and environment specifications for the PeakATail manuscript (companion to BMGLab/PeakATail)
- GSNetAct-benchmark Public
Snakemake workflow, benchmark harness and analysis scripts reproducing the GSNetAct manuscript (companion to BMGLab/GSNetAct)
- fusarium-oxysporum-six-avr2-lineage Public
Analysis code for: Lineage predicts SIX effector repertoire but not Avr2 race genotype in Fusarium oxysporum isolates from Türkiye
- peakatail-hub Public
- TRclinsafe Public
- fusarium-oxysporum-fsp-audit Public
Per-label and per-deposit audit of 363 public Fusarium oxysporum genomes: forma specialis monophyly, redundancy and mislabelled deposits (Akal & Kaymaz)
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